Organisation Name: Ontario Institute for Cancer Research
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Position: Computational Biologist Site: MaRS Centre, Toronto Department: Computational Biology Reports To: Principal Investigator – Jared Simpson Salary: Commensurate with level of experience Hours: 35 hours/week Status: Full-time, Temporary (3 year contract) The Ontario Institute for Cancer Research (OICR) is seeking a Computational Biologist to work in the lab of Dr. Jared Simpson. The Simpson lab at OICR develops algorithms and software for processing genome sequencing data. A particular interest of the group is developing methods to perform genome assembly, variation discovery and base modification detection for the Oxford Nanopore long read sequencing instruments. The successful applicant will help develop and apply our methods to large datasets that are being generated in collaboration with nearby hospitals and research institutes. The possible projects range from building pipelines for de novo assembly, analyzing cancer genomes or the development of targeted panels for assaying high-impact mutations in cancer. RESPONSIBILITIES: Develop tools and methods to analyze data generated by nanopore sequencers; Build reproducible, shareable pipelines for processing large datasets; Analyze, test and interpret the results of your software to ensure accuracy and robustness; Collaborate with internal and external scientists. QUALIFICATIONS A Bachelor’s degree in computer science, mathematics, bioinformatics or a related discipline; Proficient in Python; Familiarity with statistics and probabilistic models; Experience working within a Linux environment; Familiar with best practices in software development like the use of version control systems, testing and coding standards; Experience with genomics or high-throughput sequencing is helpful but not required. OICR is an innovative cancer research institute located in the MaRS Centre in the Discovery District in downtown Toronto. OICR is addressing significant challenges in cancer research with multi-disciplinary, multi-institutional teams. New discoveries to prevent, detect and treat cancer will be moved from the bench to practical applications in patients. The OICR team is growing quickly. We are innovative, dedicated professionals who bring expertise to each of our roles. We are looking for individuals interested in being part of a culture of excellence that will result in Ontario being recognized internationally as a leading jurisdiction for cancer research. Launched in December 2005, OICR is an independent institute funded by the Government of Ontario through the Ministry of Colleges and Universities. For more information about OICR, please visit the website at www.oicr.on.ca. CLOSING DATE: Until filled OICR is an inclusive employer dedicated to building a diverse workforce. We encourage applications from all qualified candidates and will accommodate applicants’ needs throughout all stages of the recruitment and selection process. Please advise the Recruiter to ensure your accessibility needs are accommodated throughout this process. Information received relating to accommodation will be addressed confidentially. The Ontario Institute for Cancer Research thanks all applicants. However, only those under consideration will be contacted. Resume Format: If you elect to apply, you will need a text or HTML version of your resume so that you can cut and paste it into the application box provided. Before you submit the completed application, you will be asked to attach one or two files to your application. Please attach your resume as a .pdf or .doc file.
